MOMD:
Mouse Oral Microbiome Database
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MOMD Genome Explorer
Selected genome:
Citrobacter koseri
19428wH4_BL23
Change genome:
Available genomes
1. Actinomyces bowdenii WMus004.1
2. Bacteroides acidifaciens 19428wH3_P2318
3. Bacteroides acidifaciens 8_33DSS_C5_S8
4. Citrobacter koseri 19428wH4_BL23
5. Dysgonomonas mossii 19428wE4_P11
6. Enterococcus gallinarum 19428wB3_C2
7. Enterococcus gallinarum ENT.1
8. Escherichia coli 19428wD4_HM13
9. Gemella palaticanis CIP106318T.1
10. Gemella sp. 19428wG2_WT2a
11. Gemella sp. GH3.1
12. Gemella sp. GL1.1
13. Granulicatella sp. 19428wC4_WM01
14. Jeotgalicoccus nanhaiensis 19428wE5_W307
15. Lactobacillus johnsonii 19428wE2_CC3
16. Lactobacillus murinus LAC.1
17. Ligilactobacillus murinus 19428wF2_HT12
18. Ligilactobacillus murinus 2_2BalbC1BO2_S2
19. Mammaliicoccus lentus 19428wC1_HT5
20. Mammaliicoccus lentus 19428wG1_AE2
21. Mammaliicoccus lentus 3_3BalbC2O2_S3
22. Mammaliicoccus sciuri 19428wE1_BL01
23. Mammaliicoccus sciuri ACT.1
24. Microbacterium paludicola 19428wA4_P1012
25. Micrococcus aloeverae 19428wE3_DK2
26. Micrococcus yunnanensis 19428wG4_IOV6
27. Muribacter muris 19428wC3_WT12
28. Muribacter muris 7_18CXCR221ANO_S7
29. Neisseria sp. 19428wB4_WF04
30. Parabacteroides goldsteinii 19428wG3_P14
31. Pasteurella sp. 19428wF3_WM03
32. Proteus mirabilis 19428wB5_irhom_Sw
33. Providencia alcalifaciens WMus003.1
34. Rothia nasimurium 19428wA5_irhom_31
35. Sanguibacter inulinus DSM100099.1
36. Shigella flexneri 19428wH2_1568
37. Staphylococcus arlettae 19428wH1_IOV5
38. Staphylococcus aureus 19428wD1_P36
39. Staphylococcus aureus 4_5BalbC4O2_S4
40. Staphylococcus aureus STF.1
41. Staphylococcus capitis GW2.1
42. Staphylococcus saprophyticus 19428wB1_WM06
43. Staphylococcus warneri 19428wF1_P912
44. Staphylococcus xylosus 19428wA1_WT6
45. Streptococcus acidominimus 19428wB2_HT4
46. Streptococcus acidominimus 6_8CXCR23O2_S6
47. Streptococcus cuniculi 19428wD2_WM131
48. Streptococcus danieliae 1_1BalbC1O2_S1
49. Streptococcus danieliae STR.1
50. Streptococcus sp. 19428wA2_WM07
51. Streptococcus sp. 19428wC2_LYSM12
52. Streptococcus sp. 19428wD3_AN2
from a total of 52 genomes
Available tools:
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PROKKA Annotation
NCBI Annotation
BLAST Against Genome
Genome Info
Taxon Description
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PROKKA Genome Annotation:
contigs: 33
bases: 4,826,282 bps
CDS: 4,459
rRNA: 10
Repeat region:
tmRNA: 1
tRNA: 81
misc RNA:
Total features: 4,551
Total number of protein coding genes annotated/found:
4,459
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Items 21 - 40
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Molecule ^
PID/GenBank ID *^
Sequences
Size (NA/AA) ^
Range
Gene Product Name
SEQF5017|JADGKP010000006.1
SEQF5017_04286
Genome Viewer
NA
AA
852/284
1290-439
Glutamate racemase
SEQF5017|JADGKP010000011.1
SEQF5017_00014
Genome Viewer
NA
AA
963/321
1311-2273
Bifunctional ligase/repressor BirA
SEQF5017|JADGKP010000001.1
SEQF5017_00029
Genome Viewer
NA
AA
354/118
1702-2055
putative protein YbaA
SEQF5017|JADGKP010000005.1
SEQF5017_04003
Genome Viewer
NA
AA
1434/478
1985-3418
hypothetical protein
SEQF5017|JADGKP010000009.1
SEQF5017_04507
Genome Viewer
NA
AA
819/273
2022-1204
Shikimate dehydrogenase (NADP(+))
SEQF5017|JADGKP010000010.1
SEQF5017_00002
Genome Viewer
NA
AA
732/244
2094-2825
hypothetical protein
SEQF5017|JADGKP010000002.1
SEQF5017_02269
Genome Viewer
NA
AA
654/218
2206-2859
D-methionine transport system permease protein MetI
SEQF5017|JADGKP010000008.1
SEQF5017_04480
Genome Viewer
NA
AA
1290/430
2289-3578
Phosphoribosylamine--glycine ligase
SEQF5017|JADGKP010000007.1
SEQF5017_04398
Genome Viewer
NA
AA
1452/484
2447-996
Trk system potassium uptake protein TrkH
SEQF5017|JADGKP010000009.1
SEQF5017_04508
Genome Viewer
NA
AA
573/191
2599-2027
Threonylcarbamoyl-AMP synthase
SEQF5017|JADGKP010000010.1
SEQF5017_00003
Genome Viewer
NA
AA
531/177
2832-3362
hypothetical protein
SEQF5017|JADGKP010000002.1
SEQF5017_02270
Genome Viewer
NA
AA
816/272
2899-3714
D-methionine-binding lipoprotein MetQ
SEQF5017|JADGKP010000003.1
SEQF5017_02916
Genome Viewer
NA
AA
2574/858
3084-511
Chaperone protein ClpB
SEQF5017|JADGKP010000007.1
SEQF5017_04399
Genome Viewer
NA
AA
615/205
3099-2485
IMPACT family member YigZ
SEQF5017|JADGKP010000006.1
SEQF5017_04287
Genome Viewer
NA
AA
1869/623
3103-1235
Vitamin B12 transporter BtuB
SEQF5017|JADGKP010000009.1
SEQF5017_04509
Genome Viewer
NA
AA
555/185
3146-2592
DNA topoisomerase 1
SEQF5017|JADGKP010000011.1
SEQF5017_00015
Genome Viewer
NA
AA
927/309
3230-2304
Pantothenate kinase
SEQF5017|JADGKP010000004.1
SEQF5017_03567
Genome Viewer
NA
AA
999/333
3377-2379
Ribose operon repressor
SEQF5017|JADGKP010000005.1
SEQF5017_04004
Genome Viewer
NA
AA
393/131
3420-3812
hypothetical protein
SEQF5017|JADGKP010000006.1
SEQF5017_04288
Genome Viewer
NA
AA
1101/367
3473-4573
tRNA/tmRNA (uracil-C(5))-methyltransferase
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Items 21 - 40
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* Click GI, UID, Gene Product to go to NCBI record
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Copyright 2020 Forsyth Institute
Page last updated: July 7, 2021 08:39:35
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